Bioinformatics with Python Cookbook - Second Edition

Finding genomic features from sequencing annotations

We will finalize this chapter and this book with a simple recipe that suggests that sometimes you can learn important things from simple unexpected results, and that apparent quality issues might mask important biological questions.

We will plot read depth (DP) across chromosome arm 2L for all the parents on our crosses. The recipe can be found on Chapter11/2L.ipynb.