Other Topics in Bioinformatics

In this chapter, we will cover the following recipes:

  • Doing metagenomics with the QIIME 2 Python API
  • Inferring shared chromosomal segments with Germline
  • Accessing the Global Biodiversity Information Facility via REST
  • Georeferencing GBIF datasets
  • Plotting protein interactions with Cytoscape the hard way

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